Genome Meta Information: Hoylesella shahii DSM 15611 (GCA_003201715.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003201715.1 | ||
| HOMD Taxon-ID | HMT-0795 | ||
| Species Name (in use by HOMD) | Hoylesella shahii | ||
| Organism Name (as deposited) | HMT-795 Hoylesella shahii DSM 15611 | ||
| Strain or Isolate | DSM 15611 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella shahii |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 620 | ||
| Contigs |
|
||
| Total Sequence Length | 3,511,526 (bp) | ||
| GC Percentage | 44.36 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/201/715/GCA_003201715.1_ASM320171v1 | ||
| CDS | 2811 | ||
| Genes | 2867 | ||
| mRNA | 2867 | ||
| misc RNA | 10 | ||
| rRNA | 2 | ||
| tRNA | 43 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.95 % | ||
| CheckM Completeness | 99.66 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM320171v1 |
| GenBank Assembly Accession | GCA_003201715.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003201715.1 [NCBI] |
| BioSample | SAMN02745169 [NCBI] |
| BioProject | PRJNA245696 [NCBI] |
| Submitter | DOE Joint Genome Institute |
| Submission Date | 2014-05-05T22:44:20.630 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | QJJX01 |
| NCBI TaxID | 1122991 |
| Isolation Source | |
| Geo Location | Japan |
