Genome Meta Information: Mycobacterium leprae MRHRU-235-G (GCA_003253775.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003253775.1 | ||
| HOMD Taxon-ID | HMT-0823 | ||
| Species Name (in use by HOMD) | Mycobacterium leprae | ||
| Organism Name (as deposited) | HMT-823 Mycobacterium leprae MRHRU-235-G | ||
| Strain or Isolate | MRHRU-235-G | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium; s__Mycobacterium leprae |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 1 | ||
| Contigs |
|
||
| Total Sequence Length | 3,187,112 (bp) | ||
| GC Percentage | 57.81 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/253/775/GCA_003253775.1_ASM325377v1 | ||
| CDS | 3882 | ||
| Genes | 3953 | ||
| mRNA | 3953 | ||
| misc RNA | 21 | ||
| rRNA | 3 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 94.99 % | ||
| CheckM Contamination | 1 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM325377v1 |
| GenBank Assembly Accession | GCA_003253775.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003253775.1 [NCBI] |
| BioSample | SAMN09104579 [NCBI] |
| BioProject | PRJNA470766 [NCBI] |
| Submitter | National JALMA Institute for Leprosy and Other Mycobacterial Diseases |
| Submission Date | 2018-05-10T06:15:04.886 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1769 |
| Isolation Source | Slit Skin |
| Geo Location | India |
