Genome Meta Information: Patescibacteria [C1 O1 F1 G1] bacterium HMT-872 GN02-872 (GCA_003260325.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003260325.1 | ||
| HOMD Taxon-ID | HMT-0872 | ||
| Species Name (in use by HOMD) | Patescibacteria [C1 O1 F1 G1] bacterium HMT-872 | ||
| Organism Name (as deposited) | HMT-872 Patescibacteria [C1 O1 F1 G1] bacterium HMT-872 GN02-872 | ||
| Strain or Isolate | GN02-872 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Patescibacteriota;c__JAEDAM01;o__BD1-5;f__UBA6164;g__GN02-872; s__GN02-872 sp003260325 |
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| Sequencing Technology | Illumina MiSeq; Illumina HiSeq | ||
| Genome Coverage | 50 | ||
| Contigs |
|
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| Total Sequence Length | 1,044,027 (bp) | ||
| GC Percentage | 25.08 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/260/325/GCA_003260325.1_ASM326032v1 | ||
| CDS | 1033 | ||
| Genes | 1065 | ||
| mRNA | 1065 | ||
| misc RNA | 1 | ||
| rRNA | 1 | ||
| tRNA | 30 | ||
| tmRNA | 0 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 0 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM326032v1 |
| GenBank Assembly Accession | GCA_003260325.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | [NCBI] |
| BioSample | SAMN05941941 [NCBI] |
| BioProject | PRJNA348708 [NCBI] |
| Submitter | Oak Ridge National Laboratory |
| Submission Date | 2016-10-25T16:28:05.733 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | MOLU01 |
| NCBI TaxID | 1912928 |
| Isolation Source | single-cell amplified by MDA; oral cavity saliva/biofilm |
| Geo Location | USA:Oak Ridge |
