Genome Meta Information: Prevotella pallens DSM 18710 (GCA_003269195.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003269195.1 | ||
| HOMD Taxon-ID | HMT-0714 | ||
| Species Name (in use by HOMD) | Prevotella pallens | ||
| Organism Name (as deposited) | HMT-714 Prevotella pallens DSM 18710 | ||
| Strain or Isolate | DSM 18710 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella pallens |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 188 | ||
| Contigs |
|
||
| Total Sequence Length | 3,053,674 (bp) | ||
| GC Percentage | 37.43 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/269/195/GCA_003269195.1_ASM326919v1 | ||
| CDS | 2505 | ||
| Genes | 2564 | ||
| mRNA | 2564 | ||
| misc RNA | 8 | ||
| rRNA | 5 | ||
| tRNA | 45 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.94 % | ||
| CheckM Completeness | 99.64 % | ||
| CheckM Contamination | 0.36 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM326919v1 |
| GenBank Assembly Accession | GCA_003269195.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003269195.1 [NCBI] |
| BioSample | SAMN05444284 [NCBI] |
| BioProject | PRJNA331400 [NCBI] |
| Submitter | DOE Joint Genome Institute |
| Submission Date | 2016-07-26T23:01:32.713 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | QLTQ01 |
| NCBI TaxID | 60133 |
| Isolation Source | missing |
| Geo Location | missing |
