Genome Meta Information: Neisseria gonorrhoeae DSM 9188 (GCA_003315235.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003315235.1 | ||
| HOMD Taxon-ID | HMT-0621 | ||
| Species Name (in use by HOMD) | Neisseria gonorrhoeae | ||
| Organism Name (as deposited) | HMT-621 Neisseria gonorrhoeae DSM 9188 | ||
| Strain or Isolate | DSM 9188 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria gonorrhoeae |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 597 | ||
| Contigs |
|
||
| Total Sequence Length | 2,142,774 (bp) | ||
| GC Percentage | 52.44 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/315/235/GCA_003315235.1_ASM331523v1 | ||
| CDS | 2092 | ||
| Genes | 2166 | ||
| mRNA | 2166 | ||
| misc RNA | 20 | ||
| rRNA | 3 | ||
| tRNA | 50 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 98.82 % | ||
| CheckM Contamination | 0.23 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM331523v1 |
| GenBank Assembly Accession | GCA_003315235.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003315235.1 [NCBI] |
| BioSample | SAMN09074774 [NCBI] |
| BioProject | PRJNA463403 [NCBI] |
| Submitter | DOE Joint Genome Institute |
| Submission Date | 2018-05-04T15:21:35.370 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | QNRU01 |
| NCBI TaxID | 485 |
| Isolation Source | missing |
| Geo Location | missing |
