Genome Meta Information: Schlegelella thermodepolymerans DSM 15344 (GCA_003349825.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003349825.1 | ||
| HOMD Taxon-ID | HMT-0024 | ||
| Species Name (in use by HOMD) | Schlegelella thermodepolymerans | ||
| Organism Name (as deposited) | HMT-024 Schlegelella thermodepolymerans DSM 15344 | ||
| Strain or Isolate | DSM 15344 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Caldimonas; s__Caldimonas thermodepolymerans |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 240 | ||
| Contigs |
|
||
| Total Sequence Length | 3,835,611 (bp) | ||
| GC Percentage | 70.32 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/349/825/GCA_003349825.1_ASM334982v1 | ||
| CDS | 3575 | ||
| Genes | 3650 | ||
| mRNA | 3650 | ||
| misc RNA | 16 | ||
| rRNA | 3 | ||
| tRNA | 55 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 99.85 % | ||
| CheckM Contamination | 0.46 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM334982v1 |
| GenBank Assembly Accession | GCA_003349825.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003349825.1 [NCBI] |
| BioSample | SAMN09064560 [NCBI] |
| BioProject | PRJNA456034 [NCBI] |
| Submitter | DOE Joint Genome Institute |
| Submission Date | 2018-05-04T04:20:25.346 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | QQAP01 |
| NCBI TaxID | 215580 |
| Isolation Source | missing |
| Geo Location | Germany |
