Genome Meta Information: Mycolicibacterium neoaurum HGMS2 (GCA_003367335.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003367335.1 | ||
| HOMD Taxon-ID | HMT-0692 | ||
| Species Name (in use by HOMD) | Mycolicibacterium neoaurum | ||
| Organism Name (as deposited) | HMT-692 Mycolicibacterium neoaurum HGMS2 | ||
| Strain or Isolate | HGMS2 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium; s__Mycobacterium neoaurum_A |
||
| Sequencing Technology | Illumina HiSeq; PacBio RSII | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 5,421,383 (bp) | ||
| GC Percentage | 66.88 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/367/335/GCA_003367335.1_ASM336733v1 | ||
| CDS | 5100 | ||
| Genes | 5185 | ||
| mRNA | 5185 | ||
| misc RNA | 26 | ||
| rRNA | 6 | ||
| tRNA | 52 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 92.87 % | ||
| CheckM Completeness | 99.63 % | ||
| CheckM Contamination | 1.82 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM336733v1 |
| GenBank Assembly Accession | GCA_003367335.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003367335.1 [NCBI] |
| BioSample | SAMN09754462 [NCBI] |
| BioProject | PRJNA483955 [NCBI] |
| Submitter | Hubei University of Technology |
| Submission Date | 2018-08-01T11:57:03.603 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1795 |
| Isolation Source | soil |
| Geo Location | China: Yichen, Hubei |
