Genome Meta Information: Cutibacterium namnetense T34998 (GCA_003384605.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003384605.1 | ||
| HOMD Taxon-ID | HMT-0791 | ||
| Species Name (in use by HOMD) | Cutibacterium namnetense | ||
| Organism Name (as deposited) | HMT-791 Cutibacterium namnetense T34998 | ||
| Strain or Isolate | T34998 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Propionibacteriales;f__Propionibacteriaceae;g__Cutibacterium; s__Cutibacterium namnetense |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 22.5 | ||
| Contigs |
|
||
| Total Sequence Length | 2,399,850 (bp) | ||
| GC Percentage | 60.6 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/384/605/GCA_003384605.1_ASM338460v1 | ||
| CDS | 2205 | ||
| Genes | 2280 | ||
| mRNA | 2280 | ||
| misc RNA | 21 | ||
| rRNA | 4 | ||
| tRNA | 49 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.4 % | ||
| CheckM Completeness | 99.18 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM338460v1 |
| GenBank Assembly Accession | GCA_003384605.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003384605.1 [NCBI] |
| BioSample | SAMN07711856 [NCBI] |
| BioProject | PRJNA393885 [NCBI] |
| Submitter | University of Washington |
| Submission Date | 2017-09-27T18:33:02.766 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | PCZS01 |
| NCBI TaxID | 1574624 |
| Isolation Source | Wound Right Shoulder operative skin |
| Geo Location | USA: Seattle |
