Genome Meta Information: Hornefia minuta ATCC 700079 (GCA_003433295.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003433295.1 | ||
| HOMD Taxon-ID | HMT-0673 | ||
| Species Name (in use by HOMD) | Hornefia minuta | ||
| Organism Name (as deposited) | HMT-673 Hornefia minuta ATCC 700079 | ||
| Strain or Isolate | ATCC 700079 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Peptostreptococcales;f__Anaerovoracaceae;g__Hornefia; s__Hornefia minuta |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 31 | ||
| Contigs |
|
||
| Total Sequence Length | 1,906,764 (bp) | ||
| GC Percentage | 46.78 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/433/295/GCA_003433295.1_ASM343329v1 | ||
| CDS | 1580 | ||
| Genes | 1650 | ||
| mRNA | 1650 | ||
| misc RNA | 19 | ||
| rRNA | 7 | ||
| tRNA | 43 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 0 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM343329v1 |
| GenBank Assembly Accession | GCA_003433295.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003433295.1 [NCBI] |
| BioSample | SAMN03897724 [NCBI] |
| BioProject | PRJNA282954 [NCBI] |
| Submitter | The Forsyth Institute |
| Submission Date | 2015-07-23T20:18:24.000 |
| Assembly Method | |
| Assembly Level | Chromosome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 888721 |
| Isolation Source | Subgingival plaque, periodontal pocket |
| Geo Location | Japan: Niigata |
