Genome Meta Information: Staphylococcus warneri OM08-17AT (GCA_003438095.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003438095.1 | ||
| HOMD Taxon-ID | HMT-0076 | ||
| Species Name (in use by HOMD) | Staphylococcus warneri | ||
| Organism Name (as deposited) | HMT-076 Staphylococcus warneri OM08-17AT | ||
| Strain or Isolate | OM08-17AT | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus warneri |
||
| Sequencing Technology | Illumina Hiseq | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,673,248 (bp) | ||
| GC Percentage | 32.42 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/438/095/GCA_003438095.1_ASM343809v1 | ||
| CDS | 2607 | ||
| Genes | 2650 | ||
| mRNA | 0 | ||
| misc RNA | 0 | ||
| rRNA | 4 | ||
| tRNA | 38 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.62 % | ||
| CheckM Completeness | 99.17 % | ||
| CheckM Contamination | 0.1 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM343809v1 |
| GenBank Assembly Accession | GCA_003438095.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003438095.1 [NCBI] |
| BioSample | SAMN09736853 [NCBI] |
| BioProject | PRJNA482748 [NCBI] |
| Submitter | BGI |
| Submission Date | 2018-07-30T02:31:15.547 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | QSTD01 |
| NCBI TaxID | 1292 |
| Isolation Source | feces |
| Geo Location | China: Shenzhen |
