Genome Meta Information: Parvimonas micra KCOM 1037 (GCA_003454775.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003454775.1 | ||
| HOMD Taxon-ID | HMT-0111 | ||
| Species Name (in use by HOMD) | Parvimonas micra | ||
| Organism Name (as deposited) | HMT-111 Parvimonas micra KCOM 1037 | ||
| Strain or Isolate | KCOM 1037 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Tissierellales;f__Peptoniphilaceae;g__Parvimonas; s__Parvimonas micra |
||
| Sequencing Technology | PacBio; Illumina HiSeq | ||
| Genome Coverage | 1407.4 | ||
| Contigs |
|
||
| Total Sequence Length | 1,661,863 (bp) | ||
| GC Percentage | 28.9 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/454/775/GCA_003454775.1_ASM345477v1 | ||
| CDS | 1517 | ||
| Genes | 1604 | ||
| mRNA | 1604 | ||
| misc RNA | 34 | ||
| rRNA | 11 | ||
| tRNA | 41 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.62 % | ||
| CheckM Completeness | 100 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM345477v1 |
| GenBank Assembly Accession | GCA_003454775.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003454775.1 [NCBI] |
| BioSample | SAMN09781070 [NCBI] |
| BioProject | PRJNA485032 [NCBI] |
| Submitter | Korean Collection for Oral Microbiology |
| Submission Date | 2018-08-08T03:45:05.563 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 33033 |
| Isolation Source | Postoperative maxillary cyst |
| Geo Location | South Korea: Gwangju |
