Genome Meta Information: Burkholderia cepacia ATCC 25416 (GCA_003546465.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003546465.1 | ||
| HOMD Taxon-ID | HMT-0571 | ||
| Species Name (in use by HOMD) | Burkholderia cepacia | ||
| Organism Name (as deposited) | HMT-571 Burkholderia cepacia ATCC 25416 | ||
| Strain or Isolate | ATCC 25416 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Burkholderia; s__Burkholderia cepacia |
||
| Sequencing Technology | Illumina; 454 | ||
| Genome Coverage | 280 | ||
| Contigs |
|
||
| Total Sequence Length | 8,567,011 (bp) | ||
| GC Percentage | 66.61 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/546/465/GCA_003546465.1_ASM354646v1 | ||
| CDS | 7735 | ||
| Genes | 7892 | ||
| mRNA | 7892 | ||
| misc RNA | 59 | ||
| rRNA | 18 | ||
| tRNA | 79 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.98 % | ||
| CheckM Completeness | 99.97 % | ||
| CheckM Contamination | 1.46 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM354646v1 |
| GenBank Assembly Accession | GCA_003546465.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003546465.1 [NCBI] |
| BioSample | SAMN02795966 [NCBI] |
| BioProject | PRJNA244016 [NCBI] |
| Submitter | Los Alamos National Laboratory |
| Submission Date | 2014-05-20T14:45:00.763 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 983594 |
| Isolation Source | Plant derived food stuff |
| Geo Location | unknown |
