Genome Meta Information: Dialister pneumosintes KCOM 1685 (GCA_003570845.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003570845.1 | ||
| HOMD Taxon-ID | HMT-0736 | ||
| Species Name (in use by HOMD) | Dialister pneumosintes | ||
| Organism Name (as deposited) | HMT-736 Dialister pneumosintes KCOM 1685 | ||
| Strain or Isolate | KCOM 1685 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Negativicutes;o__Veillonellales;f__Dialisteraceae;g__Allisonella; s__Allisonella pneumosinta |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 4626.8 | ||
| Contigs |
|
||
| Total Sequence Length | 1,247,407 (bp) | ||
| GC Percentage | 35.16 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/570/845/GCA_003570845.1_ASM357084v1 | ||
| CDS | 1168 | ||
| Genes | 1249 | ||
| mRNA | 1249 | ||
| misc RNA | 17 | ||
| rRNA | 13 | ||
| tRNA | 50 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 91.78 % | ||
| CheckM Contamination | 2.35 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM357084v1 |
| GenBank Assembly Accession | GCA_003570845.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003570845.1 [NCBI] |
| BioSample | SAMN09767654 [NCBI] |
| BioProject | PRJNA484675 [NCBI] |
| Submitter | Korean Collection for Oral Microbiology |
| Submission Date | 2018-08-06T03:14:05.440 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | QWKU01 |
| NCBI TaxID | 39950 |
| Isolation Source | Pericoronitis |
| Geo Location | South Korea: Gwangju |
