Genome Meta Information: Microbacterium sp. HMT-186 AG790 (GCA_003634765.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003634765.1 | ||
| HOMD Taxon-ID | HMT-0186 | ||
| Species Name (in use by HOMD) | Microbacterium sp. HMT-186 | ||
| Organism Name (as deposited) | HMT-186 Microbacterium sp. HMT-186 AG790 | ||
| Strain or Isolate | AG790 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium; s__Microbacterium sp000411455 |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 251 | ||
| Contigs |
|
||
| Total Sequence Length | 3,144,229 (bp) | ||
| GC Percentage | 69.67 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/634/765/GCA_003634765.1_ASM363476v1 | ||
| CDS | 2908 | ||
| Genes | 2970 | ||
| mRNA | 2970 | ||
| misc RNA | 9 | ||
| rRNA | 3 | ||
| tRNA | 49 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.29 % | ||
| CheckM Contamination | 1.16 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM363476v1 |
| GenBank Assembly Accession | GCA_003634765.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003634765.1 [NCBI] |
| BioSample | SAMN09083411 [NCBI] |
| BioProject | PRJNA456351 [NCBI] |
| Submitter | DOE Joint Genome Institute |
| Submission Date | 2018-05-07T15:18:48.490 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | RBWZ01 |
| NCBI TaxID | 2183995 |
| Isolation Source | missing |
| Geo Location | Italy |
