Taxon Table | Genome Table
Genome Meta Information:
Segatella
oulorum
bin_27 (GCA_003640305.1)
| HOMD Genome-ID |
GCA_003640305.1
|
| HOMD Taxon-ID |
HMT-0288
|
| Species Name (in use by HOMD) |
Segatella oulorum
|
| Organism Name (as deposited) |
HMT-288 Segatella oulorum bin_27
|
| Strain or Isolate |
bin_27
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella;
s__Prevotella oulorum |
| Sequencing Technology |
Illumina NextSeq 500
|
| Genome Coverage |
8.35631
|
| Contigs |
Number of Contigs: 246
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
2,201,265 (bp) |
| GC Percentage |
48.15
|
| MAG |
yes
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/640/305/GCA_003640305.1_ASM364030v1
|
| CDS |
1790
|
| Genes |
1830
|
| mRNA |
1830
|
| misc RNA |
9
|
| rRNA |
1
|
| tRNA |
29
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
%
|
| CheckM Completeness |
94.81 %
|
| CheckM Contamination |
1.46 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM364030v1
|
| GenBank Assembly Accession |
GCA_003640305.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_003640305.1
[NCBI]
|
| BioSample |
SAMN10134577
[NCBI]
|
| BioProject |
PRJNA383868
[NCBI]
|
| Submitter |
J. Craig Venter Institute
|
| Submission Date |
2018-09-26T17:53:04.693
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
RBKH01
|
| NCBI TaxID |
59823
|
| Isolation Source |
supragingival plaque isolated from 88 juvenile twins
|
| Geo Location |
Australia
|
