Genome Meta Information: Mycoplasmopsis fermentans MF-I1 (GCA_003704055.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003704055.1 | ||
| HOMD Taxon-ID | HMT-0607 | ||
| Species Name (in use by HOMD) | Mycoplasmopsis fermentans | ||
| Organism Name (as deposited) | HMT-607 Mycoplasmopsis fermentans MF-I1 | ||
| Strain or Isolate | MF-I1 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Mycoplasmatales;f__Metamycoplasmataceae;g__Mycoplasmopsis; s__Mycoplasmopsis fermentans |
||
| Sequencing Technology | 454 FLX | ||
| Genome Coverage | 75 | ||
| Contigs |
|
||
| Total Sequence Length | 928,572 (bp) | ||
| GC Percentage | 26.86 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/704/055/GCA_003704055.1_ASM370405v1 | ||
| CDS | 1626 | ||
| Genes | 1672 | ||
| mRNA | 1672 | ||
| misc RNA | 5 | ||
| rRNA | 4 | ||
| tRNA | 36 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.1 % | ||
| CheckM Completeness | 88.42 % | ||
| CheckM Contamination | 1.57 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM370405v1 |
| GenBank Assembly Accession | GCA_003704055.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003704055.1 [NCBI] |
| BioSample | SAMN07730986 [NCBI] |
| BioProject | PRJNA205184 [NCBI] |
| Submitter | IGS |
| Submission Date | 2017-10-02T11:45:03.910 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | ATFG01 |
| NCBI TaxID | 1337387 |
| Isolation Source | HIV infected cell supernatant |
| Geo Location | USA |
