Genome Meta Information: Proteus mirabilis PmBC1123 (GCA_003855615.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_003855615.1 | ||
| HOMD Taxon-ID | HMT-0676 | ||
| Species Name (in use by HOMD) | Proteus mirabilis | ||
| Organism Name (as deposited) | HMT-676 Proteus mirabilis PmBC1123 | ||
| Strain or Isolate | PmBC1123 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Proteus; s__Proteus mirabilis |
||
| Sequencing Technology | Illumina HiSeq; PacBio RSII | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 4,074,828 (bp) | ||
| GC Percentage | 39.09 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/855/615/GCA_003855615.1_ASM385561v1 | ||
| CDS | 3639 | ||
| Genes | 3816 | ||
| mRNA | 3816 | ||
| misc RNA | 73 | ||
| rRNA | 22 | ||
| tRNA | 81 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.79 % | ||
| CheckM Completeness | 90.23 % | ||
| CheckM Contamination | 3.84 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM385561v1 |
| GenBank Assembly Accession | GCA_003855615.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_003855615.1 [NCBI] |
| BioSample | SAMN10458127 [NCBI] |
| BioProject | PRJNA506335 [NCBI] |
| Submitter | Sichuan University |
| Submission Date | 2018-11-21T03:39:05.020 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 584 |
| Isolation Source | swine |
| Geo Location | China: Mianyang |
