Taxon Table | Genome Table
Genome Meta Information:
Bacteroides
heparinolyticus
OH1047_COT-310 (GCA_003932775.1)
| HOMD Genome-ID |
GCA_003932775.1
|
| HOMD Taxon-ID |
HMT-0630
|
| Species Name (in use by HOMD) |
Bacteroides heparinolyticus
|
| Organism Name (as deposited) |
HMT-630 Bacteroides heparinolyticus OH1047_COT-310
|
| Strain or Isolate |
OH1047_COT-310
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides;
s__Bacteroides heparinolyticus |
| Sequencing Technology |
Illumina MiSeq
|
| Genome Coverage |
223
|
| Contigs |
Number of Contigs: 202
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
3,533,051 (bp) |
| GC Percentage |
47.2
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/932/775/GCA_003932775.1_ASM393277v1
|
| CDS |
2855
|
| Genes |
2946
|
| mRNA |
2946
|
| misc RNA |
26
|
| rRNA |
7
|
| tRNA |
57
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
97.39 %
|
| CheckM Completeness |
98.58 %
|
| CheckM Contamination |
2.39 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM393277v1
|
| GenBank Assembly Accession |
GCA_003932775.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_003932775.1
[NCBI]
|
| BioSample |
SAMN10478692
[NCBI]
|
| BioProject |
PRJNA506243
[NCBI]
|
| Submitter |
UC Davis
|
| Submission Date |
2018-11-26T15:20:04.900
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
RQYF01
|
| NCBI TaxID |
28113
|
| Isolation Source |
dog mouth
|
| Geo Location |
United Kingdom: Leicestershire
|
