Taxon Table | Genome Table
Genome Meta Information:
Streptococcus
cristatus
A52 (GCA_003943505.1)
| HOMD Genome-ID |
GCA_003943505.1
|
| HOMD Taxon-ID |
HMT-0578
|
| Species Name (in use by HOMD) |
Streptococcus cristatus
|
| Organism Name (as deposited) |
HMT-578 Streptococcus cristatus A52
|
| Strain or Isolate |
A52
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;
s__Streptococcus cristatus_E |
| Sequencing Technology |
Illumina MiSeq
|
| Genome Coverage |
60
|
| Contigs |
Number of Contigs: 132
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
2,080,561 (bp) |
| GC Percentage |
42.68
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/943/505/GCA_003943505.1_ASM394350v1
|
| CDS |
2032
|
| Genes |
2114
|
| mRNA |
2114
|
| misc RNA |
29
|
| rRNA |
6
|
| tRNA |
46
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
94.31 %
|
| CheckM Completeness |
99.23 %
|
| CheckM Contamination |
1.26 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM394350v1
|
| GenBank Assembly Accession |
GCA_003943505.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_003943505.1
[NCBI]
|
| BioSample |
SAMN09631684
[NCBI]
|
| BioProject |
PRJNA480251
[NCBI]
|
| Submitter |
Clemson University
|
| Submission Date |
2018-07-09T11:29:04.377
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
RJPS01
|
| NCBI TaxID |
45634
|
| Isolation Source |
dental plaque
|
| Geo Location |
USA: Florida
|
