Genome Meta Information: Brevundimonas diminuta ATCC(B) 19146 (GCA_004102925.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_004102925.1 | ||
| HOMD Taxon-ID | HMT-0590 | ||
| Species Name (in use by HOMD) | Brevundimonas diminuta | ||
| Organism Name (as deposited) | HMT-590 Brevundimonas diminuta ATCC(B) 19146 | ||
| Strain or Isolate | ATCC(B) 19146 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Brevundimonas; s__Brevundimonas diminuta |
||
| Sequencing Technology | Oxford Nanopore GridION | ||
| Genome Coverage | 187 | ||
| Contigs |
|
||
| Total Sequence Length | 3,551,819 (bp) | ||
| GC Percentage | 67.43 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/004/102/925/GCA_004102925.1_ASM410292v1 | ||
| CDS | 3447 | ||
| Genes | 3521 | ||
| mRNA | 3521 | ||
| misc RNA | 15 | ||
| rRNA | 6 | ||
| tRNA | 53 | ||
| tmRNA | 0 | ||
| ANI (Average Nucluotide Identity) | 97.77 % | ||
| CheckM Completeness | 99.41 % | ||
| CheckM Contamination | 4.62 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM410292v1 |
| GenBank Assembly Accession | GCA_004102925.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_004102925.1 [NCBI] |
| BioSample | SAMN10737780 [NCBI] |
| BioProject | PRJNA514930 [NCBI] |
| Submitter | Zhejiang Tianke High Technology Development Co.Ltd. |
| Submission Date | 2019-01-13T22:26:03.590 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 293 |
| Isolation Source | |
| Geo Location | missing |
