Genome Meta Information: Nanosyncoccus alces TM7_G3_2_Rum_HOT_351B (GCA_004138395.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_004138395.1 | ||
| HOMD Taxon-ID | HMT-0367 | ||
| Species Name (in use by HOMD) | Nanosyncoccus alces | ||
| Organism Name (as deposited) | HMT-367 Nanosyncoccus alces TM7_G3_2_Rum_HOT_351B | ||
| Strain or Isolate | TM7_G3_2_Rum_HOT_351B | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Patescibacteriota;c__Saccharimonadia;o__Saccharimonadales;f__Nanosyncoccaceae;g__Nanosyncoccus; s__Nanosyncoccus alces |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 726,940 (bp) | ||
| GC Percentage | 43.27 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/004/138/395/GCA_004138395.1_ASM413839v1 | ||
| CDS | 712 | ||
| Genes | 762 | ||
| mRNA | 762 | ||
| misc RNA | 2 | ||
| rRNA | 2 | ||
| tRNA | 46 | ||
| tmRNA | 0 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 79.86 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | No Pangenomes Available. | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM413839v1 |
| GenBank Assembly Accession | GCA_004138395.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_004138395.1 [NCBI] |
| BioSample | SAMN08449951 [NCBI] |
| BioProject | PRJNA384792 [NCBI] |
| Submitter | University of Washington |
| Submission Date | 2018-02-01T03:29:03.340 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | PRLM01 |
| NCBI TaxID | 2171997 |
| Isolation Source | rumen |
| Geo Location | not applicable |
