Genome Meta Information: Nanoperiomorbus periodonticus TM7_ EAM_G5_1_HOT_356 (GCA_004138455.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_004138455.1 | ||
| HOMD Taxon-ID | HMT-0356 | ||
| Species Name (in use by HOMD) | Nanoperiomorbus periodonticus | ||
| Organism Name (as deposited) | HMT-356 Nanoperiomorbus periodonticus TM7_ EAM_G5_1_HOT_356 | ||
| Strain or Isolate | TM7_ EAM_G5_1_HOT_356 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Patescibacteriota;c__Saccharimonadia;o__Saccharimonadales;f__Nanoperiomorbaceae;g__Nanoperiomorbus; s__Nanoperiomorbus periodonticus |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 740,889 (bp) | ||
| GC Percentage | 50.8 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/004/138/455/GCA_004138455.1_ASM413845v1 | ||
| CDS | 659 | ||
| Genes | 705 | ||
| mRNA | 705 | ||
| misc RNA | 2 | ||
| rRNA | 1 | ||
| tRNA | 43 | ||
| tmRNA | 0 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 75.86 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM413845v1 |
| GenBank Assembly Accession | GCA_004138455.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_004138455.1 [NCBI] |
| BioSample | SAMN08449950 [NCBI] |
| BioProject | PRJNA384792 [NCBI] |
| Submitter | University of Washington |
| Submission Date | 2018-02-01T03:29:03.326 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | PRLO01 |
| NCBI TaxID | 2171989 |
| Isolation Source | Oral cavity |
| Geo Location | not applicable |
