Genome Meta Information: Bacteroides heparinolyticus DSM 23917 (GCA_004342845.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_004342845.1 | ||
| HOMD Taxon-ID | HMT-0630 | ||
| Species Name (in use by HOMD) | Bacteroides heparinolyticus | ||
| Organism Name (as deposited) | HMT-630 Bacteroides heparinolyticus DSM 23917 | ||
| Strain or Isolate | DSM 23917 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides; s__Bacteroides heparinolyticus |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 411 | ||
| Contigs |
|
||
| Total Sequence Length | 3,643,328 (bp) | ||
| GC Percentage | 47.19 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/004/342/845/GCA_004342845.1_ASM434284v1 | ||
| CDS | 3033 | ||
| Genes | 3142 | ||
| mRNA | 3142 | ||
| misc RNA | 43 | ||
| rRNA | 5 | ||
| tRNA | 60 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 98.46 % | ||
| CheckM Contamination | 3.1 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM434284v1 |
| GenBank Assembly Accession | GCA_004342845.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_004342845.1 [NCBI] |
| BioSample | SAMN10864733 [NCBI] |
| BioProject | PRJNA519314 [NCBI] |
| Submitter | DOE Joint Genome Institute |
| Submission Date | 2019-02-01T22:23:10.596 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | SLXB01 |
| NCBI TaxID | 28113 |
| Isolation Source | missing |
| Geo Location | missing |
