Genome Meta Information: Staphylococcus aureus JK3137 (GCA_004614315.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_004614315.1 | ||
| HOMD Taxon-ID | HMT-0550 | ||
| Species Name (in use by HOMD) | Staphylococcus aureus | ||
| Organism Name (as deposited) | HMT-550 Staphylococcus aureus JK3137 | ||
| Strain or Isolate | JK3137 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus aureus |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 366 | ||
| Contigs |
|
||
| Total Sequence Length | 2,955,000 (bp) | ||
| GC Percentage | 32.82 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/004/614/315/GCA_004614315.1_ASM461431v1 | ||
| CDS | 2797 | ||
| Genes | 2995 | ||
| mRNA | 2995 | ||
| misc RNA | 116 | ||
| rRNA | 19 | ||
| tRNA | 62 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.9 % | ||
| CheckM Completeness | 97.38 % | ||
| CheckM Contamination | 0.39 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM461431v1 |
| GenBank Assembly Accession | GCA_004614315.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_004614315.1 [NCBI] |
| BioSample | SAMN06830443 [NCBI] |
| BioProject | PRJNA384212 [NCBI] |
| Submitter | University of Calgary |
| Submission Date | 2017-04-25T13:20:03.623 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1280 |
| Isolation Source | unknown |
| Geo Location | Canada: Calgary |
