Genome Meta Information: Mycolicibacterium neoaurum DSM 44074 (GCA_005670605.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_005670605.1 | ||
| HOMD Taxon-ID | HMT-0692 | ||
| Species Name (in use by HOMD) | Mycolicibacterium neoaurum | ||
| Organism Name (as deposited) | HMT-692 Mycolicibacterium neoaurum DSM 44074 | ||
| Strain or Isolate | DSM 44074 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium; s__Mycobacterium neoaurum |
||
| Sequencing Technology | Illumina-Hiseq 2000 | ||
| Genome Coverage | 176 | ||
| Contigs |
|
||
| Total Sequence Length | 5,477,923 (bp) | ||
| GC Percentage | 66.68 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/005/670/605/GCA_005670605.1_ASM567060v1 | ||
| CDS | 5200 | ||
| Genes | 5276 | ||
| mRNA | 5276 | ||
| misc RNA | 24 | ||
| rRNA | 3 | ||
| tRNA | 48 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 99.57 % | ||
| CheckM Contamination | 1.93 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM567060v1 |
| GenBank Assembly Accession | GCA_005670605.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_005670605.1 [NCBI] |
| BioSample | SAMN08339099 [NCBI] |
| BioProject | PRJNA429429 [NCBI] |
| Submitter | Uppsala University |
| Submission Date | 2018-01-10T10:56:13.196 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | POTO01 |
| NCBI TaxID | 1795 |
| Isolation Source | soil |
| Geo Location | missing |
