Genome Meta Information: Saccharimonas sicarius PM004 (GCA_005697055.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_005697055.1 | ||
| HOMD Taxon-ID | HMT-0955 | ||
| Species Name (in use by HOMD) | Saccharimonas sicarius | ||
| Organism Name (as deposited) | HMT-955 Saccharimonas sicarius PM004 | ||
| Strain or Isolate | PM004 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Patescibacteriota;c__Saccharimonadia;o__Saccharimonadales;f__Saccharimonadaceae;g__Saccharimonas; s__Saccharimonas sp010202265 |
||
| Sequencing Technology | PacBio RS II | ||
| Genome Coverage | 917 | ||
| Contigs |
|
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| Total Sequence Length | 842,202 (bp) | ||
| GC Percentage | 46.8 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/005/697/055/GCA_005697055.1_ASM569705v1 | ||
| CDS | 837 | ||
| Genes | 890 | ||
| mRNA | 890 | ||
| misc RNA | 5 | ||
| rRNA | 3 | ||
| tRNA | 45 | ||
| tmRNA | 0 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 0 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM569705v1 |
| GenBank Assembly Accession | GCA_005697055.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_005697055.1 [NCBI] |
| BioSample | SAMN11483327 [NCBI] |
| BioProject | PRJNA282954 [NCBI] |
| Submitter | The Forsyth Institute |
| Submission Date | 2019-04-23T14:32:06.010 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 2572087 |
| Isolation Source | human oral cavity UC16 |
| Geo Location | USA: Cambridge, Massachusetts |
