Genome Meta Information: Micrococcus luteus ATCC 4698 (GCA_006094415.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_006094415.1 | ||
| HOMD Taxon-ID | HMT-0087 | ||
| Species Name (in use by HOMD) | Micrococcus luteus | ||
| Organism Name (as deposited) | HMT-087 Micrococcus luteus ATCC 4698 | ||
| Strain or Isolate | ATCC 4698 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Micrococcaceae;g__Micrococcus; s__Micrococcus luteus |
||
| Sequencing Technology | Oxford Nanopore GridION; Illumina HiSeq | ||
| Genome Coverage | 300 | ||
| Contigs |
|
||
| Total Sequence Length | 2,560,556 (bp) | ||
| GC Percentage | 73.07 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/006/094/415/GCA_006094415.1_ASM609441v1 | ||
| CDS | 2403 | ||
| Genes | 2481 | ||
| mRNA | 2481 | ||
| misc RNA | 12 | ||
| rRNA | 6 | ||
| tRNA | 59 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.95 % | ||
| CheckM Completeness | 95.34 % | ||
| CheckM Contamination | 0.44 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM609441v1 |
| GenBank Assembly Accession | GCA_006094415.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_006094415.1 [NCBI] |
| BioSample | SAMN10761220 [NCBI] |
| BioProject | PRJNA515542 [NCBI] |
| Submitter | Zhejiang Tianke High Technology Development Co.Ltd. |
| Submission Date | 2019-01-16T21:09:04.017 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1270 |
| Isolation Source | |
| Geo Location | missing |
