Genome Meta Information: Parabacteroides distasonis CavFT-hAR46 (GCA_006149185.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_006149185.1 | ||
| HOMD Taxon-ID | HMT-0973 | ||
| Species Name (in use by HOMD) | Parabacteroides distasonis | ||
| Organism Name (as deposited) | HMT-973 Parabacteroides distasonis CavFT-hAR46 | ||
| Strain or Isolate | CavFT-hAR46 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Tannerellaceae;g__Parabacteroides; s__Parabacteroides distasonis |
||
| Sequencing Technology | PacBio RSII | ||
| Genome Coverage | 168 | ||
| Contigs |
|
||
| Total Sequence Length | 4,952,323 (bp) | ||
| GC Percentage | 45.2 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/006/149/185/GCA_006149185.1_ASM614918v1 | ||
| CDS | 4125 | ||
| Genes | 4254 | ||
| mRNA | 4254 | ||
| misc RNA | 27 | ||
| rRNA | 21 | ||
| tRNA | 80 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.77 % | ||
| CheckM Completeness | 98.67 % | ||
| CheckM Contamination | 0.92 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM614918v1 |
| GenBank Assembly Accession | GCA_006149185.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_006149185.1 [NCBI] |
| BioSample | SAMN11642307 [NCBI] |
| BioProject | PRJNA542869 [NCBI] |
| Submitter | Case Western Reserve University School of Medicine |
| Submission Date | 2019-05-14T13:58:06.543 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 823 |
| Isolation Source | intramural gut wall |
| Geo Location | USA: Cleveland |
