Genome Meta Information: Levilactobacillus brevis UCCLB95 (GCA_006228265.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_006228265.1 | ||
| HOMD Taxon-ID | HMT-0558 | ||
| Species Name (in use by HOMD) | Levilactobacillus brevis | ||
| Organism Name (as deposited) | HMT-558 Levilactobacillus brevis UCCLB95 | ||
| Strain or Isolate | UCCLB95 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Levilactobacillus; s__Levilactobacillus brevis |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 186.82 | ||
| Contigs |
|
||
| Total Sequence Length | 2,528,774 (bp) | ||
| GC Percentage | 45.87 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/006/228/265/GCA_006228265.1_ASM622826v1 | ||
| CDS | 2488 | ||
| Genes | 2596 | ||
| mRNA | 2596 | ||
| misc RNA | 28 | ||
| rRNA | 15 | ||
| tRNA | 64 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.77 % | ||
| CheckM Completeness | 89.38 % | ||
| CheckM Contamination | 4.36 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM622826v1 |
| GenBank Assembly Accession | GCA_006228265.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_006228265.1 [NCBI] |
| BioSample | SAMN08354483 [NCBI] |
| BioProject | PRJNA429618 [NCBI] |
| Submitter | University College Cork |
| Submission Date | 2018-01-11T11:34:02.726 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1580 |
| Isolation Source | |
| Geo Location | Netherlands |
