Taxon Table | Genome Table
Genome Meta Information:
Bradyrhizobium
elkanii
NBRC 14791 (GCA_006539665.1)
| HOMD Genome-ID |
GCA_006539665.1
|
| HOMD Taxon-ID |
HMT-0597
|
| Species Name (in use by HOMD) |
Bradyrhizobium elkanii
|
| Organism Name (as deposited) |
HMT-597 Bradyrhizobium elkanii NBRC 14791
|
| Strain or Isolate |
NBRC 14791
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Xanthobacteraceae;g__Bradyrhizobium;
s__Bradyrhizobium elkanii |
| Sequencing Technology |
Illumina HiSeq 1000
|
| Genome Coverage |
98
|
| Contigs |
Number of Contigs: 289
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
9,260,234 (bp) |
| GC Percentage |
63.75
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/006/539/665/GCA_006539665.1_ASM653966v1
|
| CDS |
8694
|
| Genes |
8807
|
| mRNA |
8807
|
| misc RNA |
57
|
| rRNA |
3
|
| tRNA |
52
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
99.99 %
|
| CheckM Completeness |
99.4 %
|
| CheckM Contamination |
0.42 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM653966v1
|
| GenBank Assembly Accession |
GCA_006539665.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_006539665.1
[NCBI]
|
| BioSample |
SAMD00097547
[NCBI]
|
| BioProject |
PRJDB5987
[NCBI]
|
| Submitter |
National Institute of Technology and Evaluation
|
| Submission Date |
2019-06-14T01:01:30.066
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
BJNL01
|
| NCBI TaxID |
29448
|
| Isolation Source |
|
| Geo Location |
missing
|
