Genome Meta Information: Staphylococcus epidermidis NBRC 100911 (GCA_006742205.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_006742205.1 | ||
| HOMD Taxon-ID | HMT-0601 | ||
| Species Name (in use by HOMD) | Staphylococcus epidermidis | ||
| Organism Name (as deposited) | HMT-601 Staphylococcus epidermidis NBRC 100911 | ||
| Strain or Isolate | NBRC 100911 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus epidermidis |
||
| Sequencing Technology | Illumina HiSeq; ONT GridION | ||
| Genome Coverage | 2187 | ||
| Contigs |
|
||
| Total Sequence Length | 2,427,041 (bp) | ||
| GC Percentage | 32.29 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/006/742/205/GCA_006742205.1_ASM674220v1 | ||
| CDS | 2193 | ||
| Genes | 2354 | ||
| mRNA | 2354 | ||
| misc RNA | 81 | ||
| rRNA | 19 | ||
| tRNA | 60 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 99.68 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM674220v1 |
| GenBank Assembly Accession | GCA_006742205.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_006742205.1 [NCBI] |
| BioSample | SAMD00169832 [NCBI] |
| BioProject | PRJDB8042 [NCBI] |
| Submitter | Biological Resource Center, National Institute of Technology and Evaluation (NBRC) |
| Submission Date | 2019-04-26T01:01:10.150 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1282 |
| Isolation Source | |
| Geo Location | missing |
