Genome Meta Information: Corynebacterium aurimucosum 15-4290 (GCA_007786365.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_007786365.1 | ||
| HOMD Taxon-ID | HMT-0450 | ||
| Species Name (in use by HOMD) | Corynebacterium aurimucosum | ||
| Organism Name (as deposited) | HMT-450 Corynebacterium aurimucosum clade-450 15-4290 | ||
| Strain or Isolate | 15-4290 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium hiratae |
||
| Sequencing Technology | IonTorrent | ||
| Genome Coverage | 721 | ||
| Contigs |
|
||
| Total Sequence Length | 2,875,801 (bp) | ||
| GC Percentage | 60.94 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/007/786/365/GCA_007786365.1_ASM778636v1 | ||
| CDS | 2695 | ||
| Genes | 2763 | ||
| mRNA | 0 | ||
| misc RNA | 8 | ||
| rRNA | 6 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 89.65 % | ||
| CheckM Completeness | 84.37 % | ||
| CheckM Contamination | 4.61 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
2) OpenAnvi`o (Interactive) OpenSVG (Preview) |
||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM778636v1 |
| GenBank Assembly Accession | GCA_007786365.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_007786365.1 [NCBI] |
| BioSample | SAMN12175573 [NCBI] |
| BioProject | PRJNA510229 [NCBI] |
| Submitter | Federal University of Bahia |
| Submission Date | 2019-07-01T21:51:06.410 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | VMTX01 |
| NCBI TaxID | 169292 |
| Isolation Source | Articular liquid |
| Geo Location | Spain |
