Genome Meta Information: Nanosyncoccus sp. HMT-364 TM7_HOT_351-SAG4 (GCA_007845135.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_007845135.1 | ||
| HOMD Taxon-ID | HMT-0364 | ||
| Species Name (in use by HOMD) | Nanosyncoccus sp. HMT-364 | ||
| Organism Name (as deposited) | HMT-364 Nanosyncoccus sp. HMT-364 TM7_HOT_351-SAG4 | ||
| Strain or Isolate | TM7_HOT_351-SAG4 | ||
| GTDB (V226) Taxonomy |
Undefined |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 622,110 (bp) | ||
| GC Percentage | 41.68 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/007/845/135/GCA_007845135.1_ASM784513v1 | ||
| CDS | 577 | ||
| Genes | 614 | ||
| mRNA | 614 | ||
| misc RNA | 0 | ||
| rRNA | 3 | ||
| tRNA | 34 | ||
| tmRNA | 0 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 0 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM784513v1 |
| GenBank Assembly Accession | GCA_007845135.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_007845135.1 [NCBI] |
| BioSample | SAMN10782572 [NCBI] |
| BioProject | PRJNA472398 [NCBI] |
| Submitter | Oak Ridge National Laboratory |
| Submission Date | 2019-01-20T22:58:06.600 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | SDRG01 |
| NCBI TaxID | 713053 |
| Isolation Source | saliva |
| Geo Location | USA: Oak Ridge, TN |
