Taxon Table | Genome Table
Genome Meta Information:
Saccharimonas
sp. HMT-349
TM7_HOT_349-SAG1 (GCA_007845455.1)
| HOMD Genome-ID |
GCA_007845455.1
|
| HOMD Taxon-ID |
HMT-0349
|
| Species Name (in use by HOMD) |
Saccharimonas sp. HMT-349
|
| Organism Name (as deposited) |
HMT-349 Saccharimonas sp. HMT-349 TM7_HOT_349-SAG1
|
| Strain or Isolate |
TM7_HOT_349-SAG1
|
GTDB (V226)
Taxonomy |
Undefined |
| Sequencing Technology |
Illumina HiSeq
|
| Genome Coverage |
100
|
| Contigs |
Number of Contigs: 145
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
993,263 (bp) |
| GC Percentage |
47.47
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/007/845/455/GCA_007845455.1_ASM784545v1
|
| CDS |
976
|
| Genes |
1009
|
| mRNA |
1009
|
| misc RNA |
3
|
| rRNA |
0
|
| tRNA |
30
|
| tmRNA |
0
|
| ANI (Average Nucluotide Identity) |
%
|
| CheckM Completeness |
0 %
|
| CheckM Contamination |
0 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
| CRISPR-cas |
1 Contig
[View]
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM784545v1
|
| GenBank Assembly Accession |
GCA_007845455.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_007845455.1
[NCBI]
|
| BioSample |
SAMN10782558
[NCBI]
|
| BioProject |
PRJNA472398
[NCBI]
|
| Submitter |
Oak Ridge National Laboratory
|
| Submission Date |
2019-01-20T22:58:06.370
|
| Assembly Method |
|
| Assembly Level |
Scaffold
|
| Sequencing Status |
|
| WGS
Project |
SDRT01
|
| NCBI TaxID |
713051
|
| Isolation Source |
subgingival fluid
|
| Geo Location |
USA: Columbus, OH
|
