Genome Meta Information: Saccharimonas sp. HMT-346 TM7_HOT_346-SAG2 (GCA_007845545.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_007845545.1 | ||
| HOMD Taxon-ID | HMT-0346 | ||
| Species Name (in use by HOMD) | Saccharimonas sp. HMT-346 | ||
| Organism Name (as deposited) | HMT-346 Saccharimonas sp. HMT-346 TM7_HOT_346-SAG2 | ||
| Strain or Isolate | TM7_HOT_346-SAG2 | ||
| GTDB (V226) Taxonomy |
Undefined |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 978,051 (bp) | ||
| GC Percentage | 47.6 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/007/845/545/GCA_007845545.1_ASM784554v1 | ||
| CDS | 956 | ||
| Genes | 1012 | ||
| mRNA | 1012 | ||
| misc RNA | 5 | ||
| rRNA | 3 | ||
| tRNA | 48 | ||
| tmRNA | 0 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 0 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM784554v1 |
| GenBank Assembly Accession | GCA_007845545.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_007845545.1 [NCBI] |
| BioSample | SAMN10782552 [NCBI] |
| BioProject | PRJNA472398 [NCBI] |
| Submitter | Oak Ridge National Laboratory |
| Submission Date | 2019-01-20T22:58:06.270 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | SDRZ01 |
| NCBI TaxID | 713049 |
| Isolation Source | subgingival fluid |
| Geo Location | USA: Columbus, OH |
