Genome Meta Information: Pseudoleptotrichia goodfellowii JCM16774 (GCA_007990505.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_007990505.1 | ||
| HOMD Taxon-ID | HMT-0845 | ||
| Species Name (in use by HOMD) | Pseudoleptotrichia goodfellowii | ||
| Organism Name (as deposited) | HMT-845 Pseudoleptotrichia goodfellowii JCM16774 | ||
| Strain or Isolate | JCM16774 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Leptotrichiaceae;g__Pseudoleptotrichia; s__Pseudoleptotrichia goodfellowii |
||
| Sequencing Technology | MinION; MiSeq | ||
| Genome Coverage | 67 | ||
| Contigs |
|
||
| Total Sequence Length | 2,290,729 (bp) | ||
| GC Percentage | 31.69 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/007/990/505/GCA_007990505.1_ASM799050v1 | ||
| CDS | 2209 | ||
| Genes | 2288 | ||
| mRNA | 2288 | ||
| misc RNA | 22 | ||
| rRNA | 12 | ||
| tRNA | 44 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.98 % | ||
| CheckM Completeness | 98.23 % | ||
| CheckM Contamination | 2.22 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM799050v1 |
| GenBank Assembly Accession | GCA_007990505.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_007990505.1 [NCBI] |
| BioSample | SAMD00156222 [NCBI] |
| BioProject | PRJDB7856 [NCBI] |
| Submitter | Division of Bacteriology, Department of Infection and Immunity, School of Medicine, Jichi Medical University |
| Submission Date | 2018-12-27T01:00:55.480 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 157692 |
| Isolation Source | |
| Geo Location | Germany |
