Genome Meta Information: Segetibacter aerophilus NBRC 106135 (GCA_007991655.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_007991655.1 | ||
| HOMD Taxon-ID | HMT-0261 | ||
| Species Name (in use by HOMD) | Segetibacter aerophilus | ||
| Organism Name (as deposited) | HMT-261 Segetibacter aerophilus NBRC 106135 | ||
| Strain or Isolate | NBRC 106135 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Segetibacter; s__Segetibacter aerophilus |
||
| Sequencing Technology | Illumina HiSeq 1000 | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 5,893,322 (bp) | ||
| GC Percentage | 40.07 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/007/991/655/GCA_007991655.1_ASM799165v1 | ||
| CDS | 5044 | ||
| Genes | 5096 | ||
| mRNA | 5096 | ||
| misc RNA | 7 | ||
| rRNA | 3 | ||
| tRNA | 41 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 98.4 % | ||
| CheckM Contamination | 1.47 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | No Pangenomes Available. | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM799165v1 |
| GenBank Assembly Accession | GCA_007991655.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_007991655.1 [NCBI] |
| BioSample | SAMD00171866 [NCBI] |
| BioProject | PRJDB6236 [NCBI] |
| Submitter | National Institute of Technology and Evaluation Biological Resource Center |
| Submission Date | 2019-05-16T01:00:55.453 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | BJYT01 |
| NCBI TaxID | 670293 |
| Isolation Source | |
| Geo Location | South Korea:Suwon |
