Genome Meta Information: Bacteroides pyogenes KG-29 (GCA_008121405.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_008121405.1 | ||
| HOMD Taxon-ID | HMT-0787 | ||
| Species Name (in use by HOMD) | Bacteroides pyogenes | ||
| Organism Name (as deposited) | HMT-787 Bacteroides pyogenes KG-29 | ||
| Strain or Isolate | KG-29 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides; s__Bacteroides pyogenes |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 86.5349 | ||
| Contigs |
|
||
| Total Sequence Length | 3,371,970 (bp) | ||
| GC Percentage | 45.98 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/008/121/405/GCA_008121405.1_ASM812140v1 | ||
| CDS | 2787 | ||
| Genes | 2891 | ||
| mRNA | 2891 | ||
| misc RNA | 36 | ||
| rRNA | 7 | ||
| tRNA | 60 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.91 % | ||
| CheckM Completeness | 99.65 % | ||
| CheckM Contamination | 0.65 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM812140v1 |
| GenBank Assembly Accession | GCA_008121405.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_008121405.1 [NCBI] |
| BioSample | SAMN12240205 [NCBI] |
| BioProject | PRJNA553588 [NCBI] |
| Submitter | University of Florida |
| Submission Date | 2019-07-09T21:13:03.787 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | VKLY01 |
| NCBI TaxID | 310300 |
| Isolation Source | |
| Geo Location | USA: Florida |
