Genome Meta Information: Corynebacterium urealyticum VH5913 (GCA_008180065.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_008180065.1 | ||
| HOMD Taxon-ID | HMT-0853 | ||
| Species Name (in use by HOMD) | Corynebacterium urealyticum | ||
| Organism Name (as deposited) | HMT-853 Corynebacterium urealyticum VH5913 | ||
| Strain or Isolate | VH5913 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium urealyticum |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 2626 | ||
| Contigs |
|
||
| Total Sequence Length | 2,315,346 (bp) | ||
| GC Percentage | 64.4 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/008/180/065/GCA_008180065.1_ASM818006v1 | ||
| CDS | 1997 | ||
| Genes | 2061 | ||
| mRNA | 2061 | ||
| misc RNA | 8 | ||
| rRNA | 3 | ||
| tRNA | 52 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.49 % | ||
| CheckM Completeness | 93.21 % | ||
| CheckM Contamination | 1.14 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM818006v1 |
| GenBank Assembly Accession | GCA_008180065.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_008180065.1 [NCBI] |
| BioSample | SAMN12621849 [NCBI] |
| BioProject | PRJNA561598 [NCBI] |
| Submitter | Federal University of Bahia |
| Submission Date | 2019-08-22T15:35:04.525 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | VSZK01 |
| NCBI TaxID | 43771 |
| Isolation Source | |
| Geo Location | Spain: Santander |
