Genome Meta Information: Staphylococcus aureus KUH140331 (GCA_008619795.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_008619795.1 | ||
| HOMD Taxon-ID | HMT-0550 | ||
| Species Name (in use by HOMD) | Staphylococcus aureus | ||
| Organism Name (as deposited) | HMT-550 Staphylococcus aureus KUH140331 | ||
| Strain or Isolate | KUH140331 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus aureus |
||
| Sequencing Technology | Illumina, Nanopore | ||
| Genome Coverage | 283 | ||
| Contigs |
|
||
| Total Sequence Length | 2,754,388 (bp) | ||
| GC Percentage | 32.84 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/008/619/795/GCA_008619795.1_ASM861979v1 | ||
| CDS | 2516 | ||
| Genes | 2709 | ||
| mRNA | 2709 | ||
| misc RNA | 112 | ||
| rRNA | 19 | ||
| tRNA | 61 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.82 % | ||
| CheckM Completeness | 98.72 % | ||
| CheckM Contamination | 0.39 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM861979v1 |
| GenBank Assembly Accession | GCA_008619795.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_008619795.1 [NCBI] |
| BioSample | SAMD00180474 [NCBI] |
| BioProject | PRJDB8599 [NCBI] |
| Submitter | Department of Microbiology, Graduate School of Medicine, Kyoto University |
| Submission Date | 2019-08-06T18:14:57.377 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1280 |
| Isolation Source | |
| Geo Location | Japan:Kyoto |
