Taxon Table | Genome Table
Genome Meta Information:
Micrococcus
luteus
ATCC 4698 (GCA_008868275.1)
| HOMD Genome-ID |
GCA_008868275.1
|
| HOMD Taxon-ID |
HMT-0087
|
| Species Name (in use by HOMD) |
Micrococcus luteus
|
| Organism Name (as deposited) |
HMT-087 Micrococcus luteus ATCC 4698
|
| Strain or Isolate |
ATCC 4698
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Micrococcaceae;g__Micrococcus;
s__Micrococcus luteus |
| Sequencing Technology |
Illumina MiSeq
|
| Genome Coverage |
34
|
| Contigs |
Number of Contigs: 299
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
2,407,404 (bp) |
| GC Percentage |
73.15
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/008/868/275/GCA_008868275.1_ASM886827v1
|
| CDS |
2185
|
| Genes |
2253
|
| mRNA |
2253
|
| misc RNA |
12
|
| rRNA |
3
|
| tRNA |
52
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
99.98 %
|
| CheckM Completeness |
98.39 %
|
| CheckM Contamination |
0.23 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM886827v1
|
| GenBank Assembly Accession |
GCA_008868275.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_008868275.1
[NCBI]
|
| BioSample |
SAMN12822026
[NCBI]
|
| BioProject |
PRJNA573690
[NCBI]
|
| Submitter |
Signature Science, LLC
|
| Submission Date |
2019-09-23T13:07:04.810
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
WBMF01
|
| NCBI TaxID |
465515
|
| Isolation Source |
not applicable
|
| Geo Location |
not applicable
|
