Genome Meta Information: Brucella anthropi T16R-87 (GCA_009017375.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_009017375.1 | ||
| HOMD Taxon-ID | HMT-0544 | ||
| Species Name (in use by HOMD) | Brucella anthropi | ||
| Organism Name (as deposited) | HMT-544 Brucella anthropi T16R-87 | ||
| Strain or Isolate | T16R-87 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Brucella; s__Brucella anthropi |
||
| Sequencing Technology | PacBio RSII | ||
| Genome Coverage | 282 | ||
| Contigs |
|
||
| Total Sequence Length | 4,736,879 (bp) | ||
| GC Percentage | 55.96 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/009/017/375/GCA_009017375.1_ASM901737v1 | ||
| CDS | 4415 | ||
| Genes | 4541 | ||
| mRNA | 4541 | ||
| misc RNA | 52 | ||
| rRNA | 12 | ||
| tRNA | 61 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.49 % | ||
| CheckM Completeness | 93.39 % | ||
| CheckM Contamination | 22.13 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM901737v1 |
| GenBank Assembly Accession | GCA_009017375.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_009017375.1 [NCBI] |
| BioSample | SAMN12541229 [NCBI] |
| BioProject | PRJNA559402 [NCBI] |
| Submitter | National Institute of Agricultural Sciences |
| Submission Date | 2019-08-08T19:58:03.356 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 529 |
| Isolation Source | rhizosphere of tomato |
| Geo Location | South Korea: Buyeo |
