Genome Meta Information: Moraxella catarrhalis T12 (GCA_009378105.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_009378105.1 | ||
| HOMD Taxon-ID | HMT-0833 | ||
| Species Name (in use by HOMD) | Moraxella catarrhalis | ||
| Organism Name (as deposited) | HMT-833 Moraxella catarrhalis T12 | ||
| Strain or Isolate | T12 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Moraxella; s__Moraxella catarrhalis |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 93.8625 | ||
| Contigs |
|
||
| Total Sequence Length | 1,918,394 (bp) | ||
| GC Percentage | 41.58 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/009/378/105/GCA_009378105.1_ASM937810v1 | ||
| CDS | 1771 | ||
| Genes | 1828 | ||
| mRNA | 1828 | ||
| misc RNA | 11 | ||
| rRNA | 3 | ||
| tRNA | 42 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.2 % | ||
| CheckM Completeness | 98.65 % | ||
| CheckM Contamination | 1.17 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM937810v1 |
| GenBank Assembly Accession | GCA_009378105.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_009378105.1 [NCBI] |
| BioSample | SAMN07672481 [NCBI] |
| BioProject | PRJNA408200 [NCBI] |
| Submitter | University of Western Australia |
| Submission Date | 2017-09-19T21:31:05.387 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | RCJA01 |
| NCBI TaxID | 480 |
| Isolation Source | Sputum, children 3 to 6 years |
| Geo Location | Taiwan |
