Genome Meta Information: Moraxella catarrhalis A16 (GCA_009378245.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_009378245.1 | ||
| HOMD Taxon-ID | HMT-0833 | ||
| Species Name (in use by HOMD) | Moraxella catarrhalis | ||
| Organism Name (as deposited) | HMT-833 Moraxella catarrhalis A16 | ||
| Strain or Isolate | A16 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Moraxella; s__Moraxella catarrhalis |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 87.6477 | ||
| Contigs |
|
||
| Total Sequence Length | 1,865,432 (bp) | ||
| GC Percentage | 41.66 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/009/378/245/GCA_009378245.1_ASM937824v1 | ||
| CDS | 1700 | ||
| Genes | 1758 | ||
| mRNA | 1758 | ||
| misc RNA | 10 | ||
| rRNA | 3 | ||
| tRNA | 44 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.16 % | ||
| CheckM Completeness | 98.94 % | ||
| CheckM Contamination | 0.21 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM937824v1 |
| GenBank Assembly Accession | GCA_009378245.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_009378245.1 [NCBI] |
| BioSample | SAMN07672471 [NCBI] |
| BioProject | PRJNA408200 [NCBI] |
| Submitter | University of Western Australia |
| Submission Date | 2017-09-19T21:31:05.240 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | NXCI01 |
| NCBI TaxID | 480 |
| Isolation Source | saliva frozen stocks |
| Geo Location | Australia |
