Genome Meta Information: Cronobacter sakazakii CFSAN068773 (GCA_009648895.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_009648895.1 | ||
| HOMD Taxon-ID | HMT-0753 | ||
| Species Name (in use by HOMD) | Cronobacter sakazakii | ||
| Organism Name (as deposited) | HMT-753 Cronobacter sakazakii CFSAN068773 | ||
| Strain or Isolate | CFSAN068773 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Cronobacter; s__Cronobacter sakazakii |
||
| Sequencing Technology | Oxford Nanopore GridION, Illumina MiSeq | ||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 4,581,781 (bp) | ||
| GC Percentage | 56.73 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/009/648/895/GCA_009648895.1_ASM964889v1 | ||
| CDS | 4162 | ||
| Genes | 4385 | ||
| mRNA | 4385 | ||
| misc RNA | 117 | ||
| rRNA | 22 | ||
| tRNA | 83 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.01 % | ||
| CheckM Completeness | 98.69 % | ||
| CheckM Contamination | 2.32 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM964889v1 |
| GenBank Assembly Accession | GCA_009648895.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_009648895.1 [NCBI] |
| BioSample | SAMN10574727 [NCBI] |
| BioProject | PRJNA541977 [NCBI] |
| Submitter | FDA Center for Food Safety and Applied Nutrition |
| Submission Date | 2018-12-10T14:31:05.080 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 28141 |
| Isolation Source | missing |
| Geo Location | missing |
