Genome Meta Information: Schaalia dentiphila FDAARGOS_732 (GCA_009730335.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_009730335.1 | ||
| HOMD Taxon-ID | HMT-0710 | ||
| Species Name (in use by HOMD) | Schaalia dentiphila | ||
| Organism Name (as deposited) | HMT-710 Schaalia dentiphila FDAARGOS_732 | ||
| Strain or Isolate | FDAARGOS_732 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Actinomycetaceae;g__Pauljensenia; s__Pauljensenia dentiphila |
||
| Sequencing Technology | Pacbio; Illumina | ||
| Genome Coverage | 1020.91 | ||
| Contigs |
|
||
| Total Sequence Length | 2,432,635 (bp) | ||
| GC Percentage | 65.26 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/009/730/335/GCA_009730335.1_ASM973033v1 | ||
| CDS | 2044 | ||
| Genes | 2112 | ||
| mRNA | 2112 | ||
| misc RNA | 10 | ||
| rRNA | 9 | ||
| tRNA | 48 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 87.96 % | ||
| CheckM Completeness | 98.47 % | ||
| CheckM Contamination | 1.03 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM973033v1 |
| GenBank Assembly Accession | GCA_009730335.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_009730335.1 [NCBI] |
| BioSample | SAMN11056447 [NCBI] |
| BioProject | PRJNA231221 [NCBI] |
| Submitter | US Food and Drug Administration |
| Submission Date | 2019-03-05T13:52:07.530 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1660 |
| Isolation Source | human oral cavity |
| Geo Location | USA:VA |
