Genome Meta Information: Megasphaera lornae M1-70 (GCA_009735755.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_009735755.1 | ||
| HOMD Taxon-ID | HMT-0841 | ||
| Species Name (in use by HOMD) | Megasphaera lornae | ||
| Organism Name (as deposited) | HMT-841 Megasphaera lornae M1-70 | ||
| Strain or Isolate | M1-70 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Negativicutes;o__Veillonellales;f__Megasphaeraceae;g__Megasphaera_C; s__Megasphaera_C lornae |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 12 | ||
| Contigs |
|
||
| Total Sequence Length | 1,774,475 (bp) | ||
| GC Percentage | 46.33 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/009/735/755/GCA_009735755.1_ASM973575v1 | ||
| CDS | 1514 | ||
| Genes | 1607 | ||
| mRNA | 1607 | ||
| misc RNA | 23 | ||
| rRNA | 17 | ||
| tRNA | 52 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 0 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM973575v1 |
| GenBank Assembly Accession | GCA_009735755.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_009735755.1 [NCBI] |
| BioSample | SAMN08434424 [NCBI] |
| BioProject | PRJNA46877 [NCBI] |
| Submitter | Virginia Commonwealth University |
| Submission Date | 2018-01-29T17:02:06.897 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | PTJT01 |
| NCBI TaxID | 2093853 |
| Isolation Source | mid-vaginal wall |
| Geo Location | USA:Virginia |
