Genome Meta Information: Bradyrhizobium elkanii USDA 61 (GCA_012871055.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_012871055.1 | ||
| HOMD Taxon-ID | HMT-0597 | ||
| Species Name (in use by HOMD) | Bradyrhizobium elkanii | ||
| Organism Name (as deposited) | HMT-597 Bradyrhizobium elkanii USDA 61 | ||
| Strain or Isolate | USDA 61 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Alphaproteobacteria;o__Rhizobiales;f__Xanthobacteraceae;g__Bradyrhizobium; s__Bradyrhizobium elkanii |
||
| Sequencing Technology | Illumina GAII | ||
| Genome Coverage | 309 | ||
| Contigs |
|
||
| Total Sequence Length | 9,649,995 (bp) | ||
| GC Percentage | 63.69 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/012/871/055/GCA_012871055.1_ASM1287105v1 | ||
| CDS | 9158 | ||
| Genes | 9285 | ||
| mRNA | 9285 | ||
| misc RNA | 69 | ||
| rRNA | 3 | ||
| tRNA | 54 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.8 % | ||
| CheckM Completeness | 97.55 % | ||
| CheckM Contamination | 1.84 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1287105v1 |
| GenBank Assembly Accession | GCA_012871055.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_012871055.1 [NCBI] |
| BioSample | SAMD00067082 [NCBI] |
| BioProject | PRJDB717 [NCBI] |
| Submitter | Kyoto Sangyo University |
| Submission Date | 2016-12-15T01:00:57.230 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1275962 |
| Isolation Source | |
| Geo Location | |
