Taxon Table | Genome Table
Genome Meta Information:
Cupriavidus
gilardii
ATCC 700815 (GCA_013004615.1)
| HOMD Genome-ID |
GCA_013004615.1
|
| HOMD Taxon-ID |
HMT-0027
|
| Species Name (in use by HOMD) |
Cupriavidus gilardii
|
| Organism Name (as deposited) |
HMT-027 Cupriavidus gilardii ATCC 700815
|
| Strain or Isolate |
ATCC 700815
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Cupriavidus;
s__Cupriavidus gilardii |
| Sequencing Technology |
NovaSeq
|
| Genome Coverage |
80.6
|
| Contigs |
Number of Contigs: 123
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
5,761,323 (bp) |
| GC Percentage |
67.43
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/004/615/GCA_013004615.1_ASM1300461v1
|
| CDS |
5172
|
| Genes |
5257
|
| mRNA |
5257
|
| misc RNA |
23
|
| rRNA |
3
|
| tRNA |
58
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
99.99 %
|
| CheckM Completeness |
89.49 %
|
| CheckM Contamination |
2.76 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM1300461v1
|
| GenBank Assembly Accession |
GCA_013004615.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_013004615.1
[NCBI]
|
| BioSample |
SAMN14517833
[NCBI]
|
| BioProject |
PRJNA622446
[NCBI]
|
| Submitter |
Bacterial Special Pathogens Branch (CDC)
|
| Submission Date |
2020-04-01T10:52:04.940
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
JABEMD01
|
| NCBI TaxID |
82541
|
| Isolation Source |
Whirl pool
|
| Geo Location |
missing
|
