Genome Meta Information: Neisseria subflava FDAARGOS_758 (GCA_013267835.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_013267835.1 | ||
| HOMD Taxon-ID | HMT-0476 | ||
| Species Name (in use by HOMD) | Neisseria subflava | ||
| Organism Name (as deposited) | HMT-476 Neisseria subflava FDAARGOS_758 | ||
| Strain or Isolate | FDAARGOS_758 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria sp000186165 |
||
| Sequencing Technology | Pacbio; Illumina | ||
| Genome Coverage | 1389.17 | ||
| Contigs |
|
||
| Total Sequence Length | 2,224,757 (bp) | ||
| GC Percentage | 49.66 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/267/835/GCA_013267835.1_ASM1326783v1 | ||
| CDS | 2058 | ||
| Genes | 2150 | ||
| mRNA | 2150 | ||
| misc RNA | 18 | ||
| rRNA | 12 | ||
| tRNA | 61 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 87.43 % | ||
| CheckM Completeness | 99.04 % | ||
| CheckM Contamination | 0.77 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM1326783v1 |
| GenBank Assembly Accession | GCA_013267835.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_013267835.1 [NCBI] |
| BioSample | SAMN11056473 [NCBI] |
| BioProject | PRJNA231221 [NCBI] |
| Submitter | US Food and Drug Administration |
| Submission Date | 2019-03-05T13:52:08.000 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 488 |
| Isolation Source | expectorated sputum |
| Geo Location | USA:VA |
